Meenakshisundaram,P. N. Manikanda Boopathi N. Senthil D. Sudhakar R. Gnanam D. Uma M. Raveendran and S. Mohankumar. Agricultural Genomics: Progress and Prospects – Ag’Omics 2021. Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India. October 21 – 23, 2021. Thannambikkai publications (ISBN: 9789391845148)
M Dhivya, S Thiruvudainambi, G Senthilraja, N Senthil, C Vanniarajan and S Vellaikumar. 2021. GC-MS analysis of metabolites from blast pathogen infected from foxtail millet. International Journal of Chemical Studies 9(1): 3017-3021 DOI:https://doi.org/10.22271/chemi.2021.v9.i1ap.11688
Qutub, M.; Chandran, S.; Rathinavel, K.; Sampathrajan, V.; Rajasekaran, R.; Manickam, S.; Adhimoolam, K.; Muniyandi, S. Natesan, S. 2021. Improvement of a Yairipok Chujak Maize Landrace from North Eastern Himalayan Region for β-Carotene Content through Molecular Marker-Assisted Backcross Breeding. Genes. 12: 762. https://doi.org/10.3390/ genes12050762
Saranya Nallusamy, Jayakanthan Mannu, Caroline Ravikumar, Kandavelmani Angamuthu, Bharathi Nathan, Kumaravadivel Nachimuthu, Gnanam Ramasamy, Raveendran Muthurajan, Mohankumar Subbarayalu and Kumar Neelakandan. 2021. Exploring Phytochemicals of Traditional Medicinal Plants Exhibiting Inhibitory Activity against Major Proteins of SARS-CoV-2 through Virtual Screening. Frontiers in Pharmacology Ethnopharmacology. doi: 10.3389/fphar.2021.667704.
Saranya Nallusamy, Jayakanthan Mannu, Caroline Ravikumar, Kandavelmani Angamuthu, Bharathi Nathan, Kumaravadivel Nachimuthu, Gnanam Ramasamy, Raveendran Muthurajan, Mohankumar Subbarayalu, Kumar Neelakandan. 2021. Exploring Phytochemicals of Traditional Medicinal Plants Exhibiting Inhibitory Activity Against Main Protease, Spike Glycoprotein, RNA-dependent RNA Polymerase and Non-Structural Proteins of SARS-CoV-2 Through Virtual Screening. Frontiers in Pharmacology, 12: 1704.
Mohammad Ekram Hussain, Shivali Sharma , A. John Joel, Ravikesavan Rajasekaran , Natesan Senthil and A. Senthil. 2021. Genetic variability of agronomic traits in extra-early maturing Introgression Lines (ILs) of pigeon pea [Cajanus cajan (L.)] Electronic Journal of Plant Breeding. https://doi.org/10.37992/2021.1202.071
Reuben-Kalu, J. I., Renuka, R., Uma, D and Gnanam, R. 2021.Cell suspension culture of Mucuna pruriens for production and improvement of L-3, 4-Dihydroxy Phenylalanine concentration Nigerian Agricultural Journal. 52 (2): 120-129. http://www.ajol.info/index.php/naj https://www.naj.asn.org
Saravanan, R., Nakkeeran,S., Saranya Nallusamy Haripriya,S., Kavino,M., Anandham,R., Krishnamoorthy,A.S., and Malathi, V.G. 2021. Differential bacterial endophytome in Foc-resistant banana cultivar displays enhanced antagonistic activity against Fusarium oxysporum f.sp. cubense (Foc). Environmental Microbiology, doi:10.1111/1462-2920.15800
Chowdhury, R., Nallusamy, S., Shanmugam, V., Loganathan A., Muthurajan, R., Sivathapandian, K.S., Paramasivam, J. and Duraialagaraja, S. 2021. Genome-wide understanding of evolutionary and functional relationships of rice Yellow Stripe-Like (YSL) transporter family in comparison with other plant species. Biologia . https://doi.org/10.1007/s11756-021-00924-5
Annie Sharon, Rishima Maheendran, Soundarrajan Vadivel, Anurabh Chakravarthy, Elakkiya Venkatesan, Geethalakshmi Vellingiri, Gnanam Ramasamy, Manikanda Boopathi Narayanan and Meenakshisundaram Palaniappan. 2021. Evaluation of the heat stress response of the invertase enzyme family among selected rice genotypes. The Pharma Innovation Journal 10(11): 229-232 .
Meena, S. , Gnanam, R., Kavitha, M., Radhamani, T., Karthikeyan, M. and Rajesh, S. 2021. Effect of Explant and Media Factors on Direct Shoot Organogenesis in Garlic (Allium sativum L.) cv. Ooty 2 . Biological Forum. 13(3a): 749-753
Pugalendhi, L. , M. Velmurugan , P. S. Kavitha ,M. K. Kalarani ,N. Senthil ,M. Deivamani,S. R. Venkatachalam. 2021. Evaluation and Characterization of High Yielding Cassava Mosaic Resistant Variety YTP2. International Journal of Plant & Soil Science, 198-208. DOI: 10.9734/ijpss/2021/v33i2230696
Priyanandhini, M. K. Kalarani, A. Senthil, N. Senthil, K. Anitha, M. Sai Venkata Ravi Teja. 2021. Assessing antioxidant system and yield of maize (Zea mays L.) inbreds under elevated temperature condition. Journal of Phytology 2021, 13: 146-151. doi: 10.25081/jp.2021.v13.7324https://updatepublishing.com/journal/index.php/jp.
Saravanan,R., Nakkeeran,S., Saranya,N., Sendhilraja, C., Renukadevi, P., Krishnamoorthy,A.S. and Malathy,V.G. 2021. Mining the genome of Bacillus velezensis VB7 for MAMP genes and Non-Ribosomal Peptide Synthetase gene clusters conferring antiviral and antifungal activity. Microorganisms, 9 (ISSN 2076-2607).
Mahantesh . K. Ganesamurthy Sayan Das R. Saraswathi C. Gopalakrishnan R. Gnanam. 2021. Validation of Genomic Selection Approach for Predicting Sheath Blight Resistance in Rice (Oryza sativa L.,) Journal of Experimental Agriculture International, 2021. 43 (11):158-167DOI: 10.9734/jeai/2021/v43i1130768.
Dhandapani, B., Ramasamy, G., Natesan, S., & Kalayanasundaram, K. 2021. Regeneration potential of different explants during micropropagation of neem tree (Azadirachta indica A. Juss.) Journal of Phytology, 13, 171–177. https://doi.org/10.25081/jp.2021.v13.7352
Manikanda Boopathi, N. ., M. Williams, R. Veera Ranjani, Allen Eldho Paul, M. Jayakanthan, N. Saranya and M. Raveendran. 2022. Development of novel SSR markers derived from genomic and transcriptomic data of Moringa oleifera L. var. PKM1 and their applicability. The Journal of Horticultural Science and Biotechnology, DOI: 10.1080/14620316.2021.2014991
Vinoth, P., B. Selvi, N. Senthil, K. Iyanar, S. Jeyarani and M. Santhiya. 2022. Estimation of gene action, combining ability and heterosis for yield and yield contributing traits in sorghum [Sorghum bicolor (L) Moench]). Electronic Journal of Plant Breeding. 12(4):1387-1397.
Manickam Sudha, Adhimoolam Karthikeyan, Balasubramaniam Madhumitha, Rajagopalan Veera Ranjani, Mayalagu Kanimoli Mathivathana, Manickam Dhasarathan, Jayakodi Murukarthick, Madiha Natchi Samu Shihabdeen, Karuppiah Eraivan Arutkani Aiyanathan, Muthaiyan Pandiyan, Natesan Senthil and Muthurajan Raveendran.2022. Dynamic Transcriptome Profiling of Mungbean Genotypes Unveil the Genes Respond to the Infection of Mungbean Yellow Mosaic Virus. Pathogens. 11(2): 190.
Manikanda Boopathi. N., M. Williams, R. Veera Ranjani, Allen Eldho Paul, M. Jayakanthan, N. Saranya & M. Raveendran. 2022. Development of novel SSR markers derived from genomic and transcriptomic data of Moringa oleifera L. var. PKM1 and their applicability, The Journal of Horticultural Science and Biotechnology 1(9): 1462-0316. DOI: 10.1080/14620316.2021.2014991
Saravanan,R., Saranya,N., Ragapriya,V., Kavino,M.,Krishnamoorthy,A.S. & Nakkeeran,S . 2022. Nematicidal Property of Clindamycin and 5-hydroxy-2-methyl Furfural (HMF) from the Banana Endophyte Bacillus velezensis (YEBBR6) Against Banana Burrowing Nematode Radopholus similisi. https://doi.org/10.1007/s12088-022-01011-2
Gnanam Ramasamy, Sivachandran Ramasamy, Nagganatha Suganthan Ravi, Rajalakshmi Krishnan, Rajesh Subramanian, Renuka Raman, Sudhakar Duraialaguraja, Raveendran Muthurajan, Jegadeeswari Vellaichamy. 2022. Haploid embryogenesis and molecular detection of somatic embryogenesis receptor-like kinase (TcSERK) genes in sliced ovary cultures of cocoa (Theobroma cacao L.). Plant Biotechnol Rep ., https://doi.org/10.1007/s11816-022-00756-y
Sekar Vinusri, Ramasamy Gnanam, Ravikumar Caroline. 2022. In silico Molecular docking for assessing anti-fungal competency of Hydroxychavicol, a phenolic compound of betel leaf (Piper betle L.) against COVID-19 associated maiming mycotic Infections. Drug Dev Ind Pharm. 21:1-43. doi: 10.1080/03639045.2022.2048665.
Renganathan, V. G., Vanniarajan, C., Senthil, N., Nirmalakumari, A., Karthikeyan, A., Veni, K., and Ramalingam,J.2021.Genetics and molecular markers for anthocyanin pigmentation in barnyard millet (Echinochloa frumentacea (Roxb.) Link).Plant Breeding,140
BharathiPukalenthy, DhasarathanManickam, KarthikeyanAdhimoolam, SandeshGoragundi Mahesh, NagalakshmiRamanathan, SarankumarChandran, VellaikumarSampathrajan, RavikesavanRajasekaran, KavithapushpamArunachalam, KalaiselviSenthil, VigneshMuthusamy, FirozHossain, SenthilNatesan. Marker aided introgression of opaque 2 (o2) allele improving lysine and tryptophan in maize (Zea mays L.). Physiology and molecular biology of Plants(2020):
VellaichamyGandhimeyyanRenganathan, ChockalingamVanniarajan, NatesanSenthil, AngamuthuNirmalakumari, AdhimoolamKarthikeyan, KannanVeni, JegadeesanRamalingam. Genetics and molecular markers for anthocyanin pigmentation in barnyard millet (Echinochloafrumentacea). Plant Breeding: 2021;00:1–8 DOI: 10.1111/pbr.12892
Sumathi, K., Ganesan, K.N., Aarthi, P. Sruthymenon, V. Devasree, S. Karthikeyan, A. Paranidharan, V. Senthil, NIntrogression of QTLs determining sorghum downy mildew (SDM) resistance into elite maize line UMI 79 through marker-assisted backcross breeding (MABC)Australasian Plant Paxthol. 49, 159–165
Harshitha, J. D., Santhanakrishnan, V. P., Meenakshisundaram, P., Hemaprabha, K., Boopathi, N. M., Raveendran, M., & Gnanam, R. 2020. Micropropagation in Moringa oleifera Lam for high-throughput multiplication. Electronic Journal of Plant Breeding, 11(04), 1205-1210.
Rishima Maheendran, V. Soundarrajan, N. Manikanda Boopathi, R. Gnanam, V. Geethalakshmi and P. Meenakshisundaram. 2020. Differential gene expression studies on HsfA4d, HsfB2a and ClpD1/HSP100 during heat stress in the rice varieties N22 and Co51. Electronic Journal of Plant Breeding 11(4):1165-1171.
Nagendra, M. S., Selvaraju, P., & N. Senthil, R. J. K. G. 2020. Application of SSR marker in genetic purity analysis of CORH 4 rice hybrid and its parental lines. Electronic Journal of Plant Breeding, 11(04), 1181-1186. http:// www.ejplantbreeding.org/ index.php/ EJPB/ article/ view/3660)
Rajamanickam S, Haokip B., Caroline, R and Nakkeeran, S. 2020. Molecular characterization of tospoviruses infecting Capsicum annuum L. Indian Journal of Biotechnology , 19: 182-191
Renganathan, V. G., Vanniarajan, C., Senthil, N., Nirmalakumari, A., Karthikeyan, A., Veni, K., and Ramalingam, J. 2021. Genetics and molecular markers for anthocyanin pigmentation in barnyard millet (Echinochloa frumentacea (Roxb.) Link). Plant Breeding.DOI: 10.1111/pbr.12892
Thiyagarajan,S. Priyal Khandelwal, N. Senthil,S. Vellaikumar ,M.. Arumugam, Abhishek Anil Dubey and S. Kathiresan,2021. Heterologous Production of Polyunsaturated Fatty Acids in E. coli Using Δ5-Desaturase Gene from Microalga Isochrysis Sp. Applied Biochemistry and Biotechnology 193:869–883. (https://doi.org/10.1007/s12010-020-03460-1)
Saranya N., Jayakanthan M.,Caroline R., Kandavelmani A., Bharathi N.,Kumaravadivel N., Gnanam R., Raveendran M., Mohankumar S., and Kumar N (2020) Short listing Phytochemicals Exhibiting Inhibitory Activity against Major Proteins of SARS-CoV-2 through Virtual Screening,(Submitted to Virus Disease journal)
Seema R, Ashish B.R, Kumar, K.K, Mohankumar S. 2020. Comparative Analysis of Chitin Synthase A dsRNA Mediated RNA Interference for Management of Crop Pests of Different Families of Lepidoptera. Front. Plant Sci. 11:427.
Rana, S., A.B. Rajurkar, K.K. Kumar and S. Mohankumar*.2020.Comparative analysis of chitin synthaseAdsRNA mediated interference for management of crop pests of different families of Lepidoptera . Frontiers in Plant Sciences - Plant Biotechnology 11, 427.
Sridharan,A.P., Sugitha,T., Karthikeyan,G., Nakkeeran, S. and Sivakumar,U. 2021. Metabolites of Trichoderma longibrachiatum EF5 inhibits soil borne pathogen, Macrophomina phaseolina by Triggering amino sugar metabolism. Microbial Pathogenesis, 150- https://doi.org/10.1016/j.micpath.2020.104714
Prema,M.S., Ganapathy,N., Malathi,V.G., Nakkeeran,S., Mohankumar,S. Kennedy,J.S., and Renukadevi,P. Role of Thripspalmi and Partheniumhysterophorus pollen in active spread of tobacco streak virus in the cotton ecosystem., Virus Research, 197979 https://doi.org/10.1016/j.virusres.2020.197979.
Vellaichamy Gandhimeyyan Renganathan, ChockalingamVanniarajan, NatesanSenthil, AngamuthuNirmalakumari, AdhimoolamKarthikeyan, KannanVeni, JegadeesanRamalingam. Genetics and molecular markers for anthocyanin pigmentation in barnyard millet (Echinochloafrumentacea). Plant Breeding: 2021;00:1–8 DOI: 10.1111/pbr.12892
Rajamanickam S, Haokip B.,Caroline, R and Nakkeeran,S.2020. Molecular characterization of tospoviruses infecting Capsicum annuum L . Indian Journal of Biotechnology,19: 182-191
Bharathi N, Caroline N, R,Vinothini B and Kumaravadivel. 2019. In silico analysis of antifungal compounds docked against Colletotrichumgloeosporioides to control of Mango Anthracnose disease. Journal of Pharmacognosy and Phytochemistry, 8 (5): 1597-1601.
Bharathi N, KavinkumarN.K, Sudheer M.M. Mohammed. 2019. AIPBASE-A comprehensive database on anti-inflammatory plants. Research Journal of Life Sciences, Bioinformatics, Pharmaceutical and Chemical Sciences, 5(6): 49-63
Divakar, MN, Rajesh, S, Renukadevi, P and Rajagopal, B. 2019. Cloning, Expression and in silico Characterization of a Truncated Antiviral Protein Gene from Bougainvillea spectabilisWilld. Int.J.Curr. Microbiol. App.Sci., 8(6): 2828-2836
Murukarthick Jayakodi,Manimekalai Madheswaran,Karthikeyan Adhimoolam, SampathPerumal, DhasarathanManickam, ThangarajKandasamy, Tae Jin Yang and SenthilNatesan, 2019 Transcriptomes of Indian barnyard millet and barnyardgrass reveal putative genes involved in drought adaptation and micronutrient accumulation. Acta Physiologiae.Plantarum. 41:66
Nandhini U, Raveendran M and Rajesh S. 2019. Isolation and Characterization of a Late Embryogenesis Abundant (LEA) Protein Coding Gene (VrLEA2) from Mung Bean (Vigna radiata (L) Wilczek). Int. J.Curr. Microbiol. App.Sci 8(6): 2289-2296
Rajesh,S., S. Preetha, G. Anand, B.Selvi and N.Shunmugavalli. 2019. Isolation and in silicocharacterization of disease resistance gene analogues (RGAs) from minor millets. Int.J.Curr.Microbiol. App.Sci. 8(1): 2773-2781.
Saranya N, Kandavelmani A and Sathyaseelan C. 2019. Variation of interaction pattern and physico-chemical properties in plant derived compounds and clinical drugs for CDK targets. Journal of Pharmacognosy and phytochemistry, 8(5): 2050-2062
McCulloch, G. A., Mohankumar, S., Subramanian, S., Rajan, T. S., Rahul, C., Surendran, R., ... & Walter, G. H. 2019. Contrasting patterns of phylogeographic structuring in two key beetle pests of stored grain in India and Australia. Journal of Pest Science, 92(3):1249-1259
Archana, P., Subashini, S, Kalpana, R., Srividhya, V., Ramalingam, J., Bharathi, N. 2018. Discovery of novel inhibitors targeting movement protein for controlling the transmission of banana bunchy top virus infection in plantain by structure-based virtual screening. International Journal of Bioinformatics Research and Applications, 14(4):305-320
Jayakanthan M and Mathur PP (2018). Role of Bioinformatics in Drug Resistance Prediction for HIV/AIDS. In: Current Trends in Bioinformatics: An Insight Methods in Molecular Biology (Proteome Bioinformatics), G. Wadhwa et al. (Eds). p. 1549: 277-286. Springer Nature Singapore Pvt Ltd
Kandavelmani, A., Bharathi, N., (2018) Personalized medicine: an emerging revolution in health care, Advances in Bioresearch, 9(3): 29-31
Peter, S.C., Dhanjal, J.K., Malik, V., Radhakrishnan, N., Jayakanthan, M. and Sundar, D. (2018). Quantitative structure-activity relationship (QSAR): modeling approaches to biological applications. In: Encyclopedia on Bioinformatics and Computational Biology, Ranganathan, S., Nakai, K., Gribskov, M. and Schonbach, C. (Eds.), p. 661-676, Elsevier, UK
Saranya, N., Kandavelmani, A., Saravanan, L. T., Shanmugapriya, S., Jayakanthan, M., Bharathi, N. and Ramalingam, J. (2018). Analysis of Rice Genome Long Non-coding RNA sequences, InternationalJournal of Agriculture Sciences, 10(4):5192-5195
Bharathi N, R. Caroline N, R,Ramalingam J. 2017. Exploring the Competence of Fungicides for Targeting Endopolygalacturonase Responsible for Alternaria Leaf Spot a Foliar Disease in Cotton -An In-SilicoApproach. Trends in Biosciences, 10(45):9275-9279
Brintha, S, S. Rajesh, R. Renuka, V. P. Santhanakrishnan and R. Gnanam. 2017. Phytochemical analysis and bioactivity prediction of compounds in methanolic extracts of CurculigoorchioidesGaertn. Journal of Pharmacognosy and Phytochemistry,6(4): 192-197
Cayalvizhi B. Sai, P. Nagarajan, M. Raveendran, R. Rabindran, J. R. Kannan Bapu, N. Senthil. 2017. Understanding the inheritance of mung bean yellow mosaic virus (MYMV) resistance in mung bean (Vignaradiata L.). Molecular Breeding,37:63
Nagendran, K., S. Mohankumar, P. Mohammed Faisal, B. Bagewadi and G. Karthikeyan.2017. Molecular evidence for the occurrence of tomato leaf curl New Delhi virus on Chayote (Sechium edule) in southern India. Virus Dis.,28(4): 425–429
Niteen Kadam, T. Anandhan, F. Lovely Mae, Lawas, C. Quinones, R. Bahuguna, M. J. Thomson, M. Dingkuhn, M. Raveendran, P. Struik, X. Yin, K. Jagadish. 2017. Genetic control of plasticity in root morphology and anatomy of rice in response to water-deficit. Plant Physiology, 174:2302-2315.
Prasad, N. S. R., R. Suresh, S. Michael Gomez, R. Chandra Babu and P. Shanmugasundaram. 2017. Identification of microsatellite markers linked to drought tolerance in rice (Oryza sativaL.) through bulked line analysis. Electronic Journal of Plant Breeding, 7(4): 895-903
Ramalingam J, Savitha P, Alagarasan G, Saraswathi R and Chandrababu R. 2017. Functional Marker Assisted Improvement of Stable Cytoplasmic Male Sterile Lines of Rice for Bacterial Blight Resistance. Front. Plant Sci., 8:1131
Sakthivel, K., R. K. Gautam, K. Manigundan, Reena Singh, J. Ramalingam, G. S. Laha, Aundy Kumar and R. Velazhahan. 2017. The host background of rice influences the resistance expression of a three genes pyramid (xa5 + xa13 + Xa21) to bacterial blight (Xanthomonas oryzae pv. oryzae) pathotypes of Indian mainland and Bay islands. Plant Breeding, 136: 357-364
Swathik Clarancia P, Jayakanthan M, and Mathur PP (2017). In SilicoApproach to Identify Potential Inhibitors for Axl-Gas6 Signaling. In: Methods in Molecular Biology (Proteome Bioinformatics), Shivakumar K and Suresh M. (Eds) p. 1549: 221-229, Springer Protocols, Springer New York
Nagendran K, Mohankumar S,Aravintharaj R, Balajia C.G. Manoranjithama S.K., Singh A.K, Rai A.B., Singh B, Karthikeyana G. 2017. The occurrence and distribution of major viruses infecting cucurbits in Tamil Nadu state, India. Crop protection, 99:10-16
Archana P, Subashini S, Kalpana Ra, Srividhya V Ramalingam J, Bharathi N,2016. Discovery of novel inhibitors targeting movement protein for controlling the transmission of Banana Bunchy Top Virus (BBTV) infection in plantain by structure-based virtual screening. International Journal of Bioinformatics Research and Applications (In press)
Karthikeyan, A., M. Sudha, P. Nagrajan, M. Pandiyan, M. Raveendran, N.Senthil and K. Angappan. 2016. Using SSR marker to identify the MYMV resistance gene in Mungbean [Vigna radiata (L.) Wilczek]. Romanian Journal of Biology - Plant Biology: 105.
Keerthana, P., R. Gnanam, D. Uma, M. Jayakanthan, K. Rajamani and R. M. Jayadeepa.2016. Polyketide natural products, acetogenins from Graviola (Annona muricata L), its biochemical, cytotoxic activity and various analyses through computational and bio-Programming methods. Current Pharmaceutical Design, 22: 1-7.
Rahman, H., R. Valarmathi, N. Jagedeeshselvam, D. Sudhakar and M. Raveendran. 2016. Over-expression of a NAC 67 transcription factor from finger millet (Eleusine coracana L.) confers tolerance against salinity and drought stress in rice. BMC Biotechnology, 16(1): 35.
Santhanakrishnan, V.P., G. Karthikeyan, P. Janaki, B. Poonkodi, R. Sathya. 2016. Isolation of Heraclenin from Aegle marmeloscorrea and screening for its antimicrobial activity through In Vitro &In Silico Studies. Natural Product Journal, 6(2): 134-141
Saranya N, Saravanan KM, Michael Gromiha M, Selvaraj S. 2016. Analysis of secondary structural and physicochemical changes in protein–protein complexes. Journal of Biomolecular Structure and Dynamics 34 (3): 508-516
Jayakanthan, M., R. Jubendradass, S.C. D'Cruz, P.P. Mathur. 2015. A use of homology modeling and molecular docking methods: to explore binding mechanisms of nonylphenol and bisphenol A with antioxidant enzymes. In: Methods in Molecular Biology (Computational Peptidology), Zhou P and Huang J. (Eds) Springer + Humana Press, p.1268:273-289.
Archana.P.,Subashini, S., Arul.L and J. Ramalingam. 2015. Identificationof Novel Inhibitors for Tobacco Mosaic Virus Infection in Solanaceae Plants. Advances in Bioinformatics, (DOI.org/10.1155/2015/198214
Cayalvizhi, B., P. Nagarajan, M. Raveendran, R. Rabindran, N. Jagadeeshselvam, J. R. Kannan Bapu and N. Senthil. 2015. Unraveling the responses of mungbean (Vignaradiata) to mungbean yellow mosaic virus through 2D-protein expression. Physiological and Molecular Plant Pathology, 3: (DOI:10.1016/j.pmpp.2015.03.001)
Dhivya, A .B, S. Subashini, R. Chandrababu and J. Ramalingam. 2015. Establishment of Millet DB: TNAU released Millet varieties with their morphological traits. International Journal of Computer Applications, 2015, 111 (14): 24 – 26.
Len J Wade, Violeta Bartolome, Ramil Mauleon, Vivek Deshmukh, Sumeet Mankar Prabakar, Muthukumar, Chandra Babu. 2015. Environmental response and genomic regions correlated with root growth and yield under drought in the Oryza SNP panel across multiple study system. PLOS ONE., DOI: 10.1371/journal.pone.0124127.
Priyadharsini, K., V. Srividhya, N. Bharathi and S. Selvaraj. 2015. Microsatellite analysis in the genome of Acanthaceae: An in silico approach. Pharmacognosy Magazine, 11:152-156.
Reena, S., Rachid Serraj and Chandra Babu, R. 2015. QTLs for drought resistance in rice. Crop Science, 55: 1-13
Saranya,N., K.M. Saravanan, M. Michael Gromiha and S. Selvaraj, 2015. Analysis of secondary structural and physico-chemical changes in protein-protein complex. Journal of Biomolecular Structure and Dynamics, 23:1-9.
Boobalan C and Bharathi N. 2014. ProDisC- A Standalone tool to predict the inter atomic distance of protein. International Journal of Multi disciplinary Educational Research., 10 (3) : 93-100.
Chandrasekar A., N.Kumaravadivel and R.Rabindran. 2014. Marker analysis and field screening studies in rice for blast resistance. Asian J of Microbiol. Biotech. Env. Sci., 16 (2): 433-436.
Chandrasekar A., N. Kumaravadivel and R. Rabindran.2014. Artificial screening for bacterial blight resistance and validation of markers for marker-assisted Selection. Asian J of Microbiol. Biotech. Env. Sci., 16 (2): 429-432
Pavithra, S., D. Velmurugan, V. Srividhya, P. Hemalatha and V. P. Santhanakrishnan. 2014. Comparative docking studies of osthol derivatives and sorafenib on BRAF V599E mutant protein. Computational Research 2(2): 13-20.
Priyadharsini, K., S. Saravanakumar, N. Bharathi and J. Ramalingam. 2014. Exploring the competence of phytochemical compounds to combat Anthracnose disease of Cucumber – An in silico approach. International Journal of Pharmacy and Pharmaceutical Science, 6 (8) : 255-258
Rahman, H., N. Jagadeeshselvam, R. Valarmathi, B. Sachin, R. Sasikala, N. Senthil, D. Sudhakar, S. Robin and R. Muthurajan. 2014. Transcriptome analysis of salinity responsiveness in contrasting genotypes of finger millet (Eleusine coracana L.) through RNA‑sequencing. Plant Mol Biol., 85(4-5): 485-503.
Sabeega begum. B, Subashini. S, Hemalatha. P, Archana. P, Bharathi. N, Nagarajan. P. 2014. In silico screening of phytochemical compounds targeting childhood absence epilepsy (CAE). International Journal of Pharmacy and Pharmaceutical Sciences, 6(5) 430-433.
Sathya. R, Renuka. R, Bharathi. N. 2014 In Silico Analysis of Antiviral Proteins in Clerodendrum Inerme. International Journal for Pharmaceutical Research Scholars, 3(2), 661-669.
Jeno Paul, R. Gnanam, R.M. Jayadeepa and L. Arul.2013. Anti Cancer Activity on Graviola, an Exciting Medicinal Plant Extract vs Various Cancer Cell Lines and a Detailed Computational Study on itsPotent Anti-Cancerous Leads. Current Topics in Medicinal Chemistry, 13(14):1666-73.
Singh N., H. Singh, and P. Nagarajan. 2013.Development of SSR markers in mung bean, Vigna radiata (L.) wilczek using in silico methods.Journal of Crop and Weed, 9(1): 69-74.
Sudha, M., P. Anusuya, Nawkar Ganesh Mahadev, A. Karthikeyan, P. Nagarajan, M. Raveendran, N. Senthil, M. Pandiyan, K. Angappan & P. Balasubramanian. 2013. Molecular studies on mungbean (Vigna radiata (L.) Wilczek) and ricebean (Vigna umbellata (Thunb.)) interspecific hybridisation for Mungbean yellow mosaic virus resistance and development of species-specific SCAR marker for ricebean. Arch. of Phytopathol. and Plt. Prot., 46(5): 503-517
Sudha , M., A. Karthikeyan , K. Angappan , P. Nagarajan , J. Ramalingam , M. Raveendran , M. Bharathi , N. Senthil , R. Rabindran , M. Pandiyan, K. Veluthambi & P. Balasubramanian. 2013. Screening of mungbean (Vigna radiata) germplasm for resistance to Mungbean yellow mosaic virus using agroinoculation, Can. J. Pl. Pathol. 35(3): 424-430
N. Singh, H. Singh and P. Nagarajan. 2013. Development of SSR markers in mung bean, Vigna radiata (L.) wilczek using in silico methods. J. Crop and Weed. 9(1): 69-74
Mallikarjuna Swamy, B. P., Helal Uddin Ahmed, Amelia Henry, Shalabh Dixit, Prashant Vikram, T. Ram, S.V. Verulkar, P. Perraju, N.P. Mandal, M. Variar, S. Robin, R. Chandra Babu, O.N. Singh, J.L. Dwivedi, S.P. Das, K.K. Mishra, R.B. Yadaw,Tamal Lata Aditya, Biswajit Karmakar, Ramil Mauleon, Kouji Satoh, Ali Moumeni, Shoshi Kikuchi, Hei Leung and Arvind Kumar.. 2013. Genetic, physiological, and gene expression analyses reveal that multiple QTLs enhance yield of rice mega-variety IR64 under drought. PLOS ONE, 8(5): e62795, p.1-11.
Suresh, R., R. Chandra Babu, S. Michael Gomez and P. Shanmugasundaram. 2013. Genetic analysis of yield traits in rice under irrigated and water stress environments. Indian J. Genet. 73: 162-168
S. Elayabalan, K. Kalaiponmani, Michael Pillay, A. Chandrasekar, R. Selvarajan, K. K. Kumar and P. Balasubramanian. 2013. Efficient regeneration of the endangered banana cultivar'Virupakshi' (AAB) via embryogenic cell suspension from immature male flowers. African Journal of Biotechnology 12: 563-569.
Shobana, VG., Kalpana. K., N. Senthil, M. Raveendran, Vellaikumar, S. Arumugachaamy, Krishnasamy, V P. Nagarajan, A. John Joel, Dhyaneswaran Palanichamy, Sangeetha, J and Saranya, S 2013. Genetic variation and stability analysis of grain iron and zinc concentrations in maize (Zeamays L.) under three environments. J Plant Nutrition, 36: 329-342
Archana Prabahar, Srividhya Vellingiri, Sathishkumar Natarajan, Kalpana Raja, Renganathan Gandhimeyyan, Bharathi Nathan. 2012. “ Ajocin (Allicin+Ajoene) can inhibit the enzymatic activity of aflatoxin biosynthesis in peanuts and prevent human carcinogenic exposure”. International Journal of Agriculture and Food Science, 2(3): 81-89
Boobalan C and Bharathi N. 2012. “ProPCalc –A tool for calculating the protein properties”.International Journal of Advanced Computer and Mathematical Sciences,3(2): 205-208
Senthil,N.,JMurukathick, M. Pandiyan,A.Larthikeyan, M. Sudha, M. Raveendran,P.Jayamani,S.Kalaiselvi and P. Nagarajan. 2012.Paithumbase-Biometrical traits based query system for studying mungbean ( Vigna radiata (L.) Wilczek) phenomics, International Journal of Applied Information Systems.4:36-39
Karthikeyan, A., M. Sudha, N. Senthil, M. Pandiyan, M. Raveendran and P. Nagarajan. 2012. Screening and identification of random amplified polymorphic DNA (RAPD) markers linked to mungbean yellow misaic virus (MYMV) resistance in mungbean (Vigna radiata L Wilczek). Archives of Pytopathology and Plant Protection, 45 (6): 712-716
Raman, A, Satish Verulkar B, Nimai Mandal P, Mukund Variar, V Shukla D, J Dwivedi L, B Singh N, O Singh N, Padmini Swain6 Swain, Ashutosh Mall K, S Robin, R Chandrababu, Abhinav Jain, Tilatoo Ram, Shailaja Hittalmani, Stephan Haefele, Hans-Peter Piepho and Arvind Kumar. 2012. Drought yield index to select high yielding rice lines under different drought stress severities. Rice, 5:31
Suji, K. K., K. Silvas Jebakumar Prince, P. Sumeet Mankhar, P. Kanagaraj, R. Poornima, K. Amutha, S. Kavitha, K. R. Biji, S. Michael Gomez and R. Chandra Babu. 2012. Evaluation of rice (Oryza sativa L.) near iso-genic lines with root QTLs for plant production and root traits in rainfed target populations of environment. Field Crops Research, 137: 89-96
Kumar, A., S. B. Verulkar, N. P. Mandal, M. Variar, V. D. Shukla, J. L. Dwivedi, B. N. Singh, O. N. Singh, P. Swain, A. K. Mall, S. Robin, R. Chandra Babu, A. Jain, S. Haefele, H. P. Piepho and A. Raman. 2012. High-yielding, drought-tolerant, stable rice genotypes for the shallow rainfed lowland drought-prone ecosystem. Field Crops Research, 133:37-47
Suji, K. K., K. R. Biji, R. Poornima, K. Silvas Jebakumar Prince, K. Amudha, S. Kavitha, Sumeet Mankar and R. Chandra Babu. 2012. Mapping QTLs for Plant Phenology and Production Traits using indica rice (Oryza sativa L.) lines adapted to rainfed environment. Molecular Biotechnology, 52: 151-160.
Pradeepa, N., P. Shanmuga Priya, K. Silvas Jebakumar Prince, S. Kavitha, R. Poornima, Mankar Sumeet Prabhakar and R. Chandra Babu. 2012. In silico analysis of a consensus QTL for drought resistance in rice (Oryza sativa L.). Online Journal of Bioinformatics, 13(1):1-13.
Beena, R., V. Thandapani and R. Chandra Babu. 2012. Physio-morphological and biochemical characterization of selected recombinant inbred lines of rice for drought resistance. Indian J. Plant Physiol. 17: 189-193.
Santoshkumar Magadum, Urbi Banerjee, Rajasekaran Ravikesavan, Krishnasamy Thiyagu, Narayanan Manikanda Boopathi, Sankaran Rajarathinam. 2012. Association analysis of yield and fibre quality characters in interspecific population of cotton (Gossypium spp.). Journal of Crop Science and Biotechnology 15(3): 239-243.
Manikanda Boopathi, N. and Pathmanaban, R. 2012. Additional insights into the adaptation of cotton plants under abiotic stresses by in silico analysis of conserved miRNAs in cotton expressed sequence tag database (dbEST). African Journal of Biotechnology Vol. 11(76), pp. 14054-14063.
Karthikeyan, A., M. Sudha, N. Senthil, M. Pandiyan, M. Raveendran and P. Nagarajan. 2012. Screening and identification of random amplified polymorphic DNA (RAPD) markers linked to mungbean yellow mosaic virus (MYMV) resistance in mungbean (Vignaradiata L Wilczek). Archives of Phytopathology and Plant Protection, 45: 712-716.
VenkateswarluYadavalli ,Gajendra P. Narwane, M.S.R. Krishna, P. Nagarajan and M. Bharathi. 2012. Tagging of brown planthopper resistance genes in F2s of IR50 \D7 Ptb33 of Rice by using bulked segregant analysis. Rice Science, 19 : 70-74
Murukarthick, J., G.S. Sreedevi., N. Senthil, M. Raveendran, D. Raghu, R. Jana Jeevan, A.R. Sakthi, K. Nageswari, L. Pugalenthi and C. Mohan. 2011. A web accessible resource for investigating cassava phenomics and genomics information. Bioinformation.,6(10):391-392.
Krishna Jagadish, S.V., M. Raveendran, Zhongwen W. Rang, Richard Malo , Sigrid Heuer , John Bennett and Peter Q. Craufurd. 2011. Spikelet Proteomic Response to Combined Water Deficit and Heat Stress in Rice (Oryza sativa cv. N22). SpringerLink.,4:1-11.
Murukarthick, J., N. Senthil, M. Raveendran, P. Prabhakaran, G. Sreedevi, M. Sumanth kumar, V.G. Shobhana, S. Dhanya, R. Khushboo, S. Arumugasamy, R. Ravikesavan and S.V.K. Jagadish. 2011. Biogen Base - An Interactive Maize Database for Phenomics Platform. International Journal of Computer Application., 2: 56-61.
Immanuel Selvaraj, C., S. Babu, P. Deepa Sankar, P. Nagarajan and M. Sabesan. 2011. Genome scanning for identification of resistant genes analogues (RGAs) in a highly durable blast resistant rice (Oryza sativa L) cultivar Moroberekan. African J. Biotech.10(34):6418-6433
Karthikeyan, A., M. Sudha, M. Pandiyan, N. Senthil, V.G. Shobana, and P. Nagarajan. 2011.Screening of MYMV resistant mungbean (Vigna radiata L Wilczek) progenies through agroinoculation. Int. J. Plant Pathol., 2 (3):115-125.
Murukarthick. J, Senthil N Raveendran. M, Prabhakaran.P, Sreedevi.G. S, Sumanth kumar. M, Shobhana. V.G, Dhanya.S, Khushboo.R Arumugasamy, S and Ravikesavan. 2011. Biogen Base - An Interactive Maize Database for Phenomics Platform. International Journal of Computer Application. (2):56-61.
Ramalingam,J., L.Arul, N.Satishkumar, D.Vignesh, K.Thiyagarajan and R.Samiyappan. 2010. TNAU Rice: Database on rice varieties released from Tamil Nadu Agricultural University.Bioinformation, 5(6):1-2.
Vignesh D, Paul Daniel, N.Raja, P.Balasubramanian, L. Arul, ExSer: A standalone tool to mine protein data bank (PDB) for secondary structural elements, Bioinformation, 2010, 4(9): 390-391.
Archana, P., N. Sathishkumar and N. Bharathi.2010. In Silico Docking Analysis of Curcumin an Inhibitor for Obesity. Int. Jrnl. of Pharma & BioSci., 224-235.
Boobalan, .C and N.Bharathi. 2010. Comparative Modeling and Functional Characterization of 3-D Structure of Late Embryogenesis Abundant Protein of Arabidopsis thaliana. Jrnl.of Adv. Bioinfo. Appl. & Res., 1(1):8-12.
Ramya, M., M. Raveendran, S.Sathiyamoorthy and J. Ramalingam 2010. Insilico analysis of drought tolerant genes in rice. Int J Biol Med Res. 1(3): 36-40.
Perumalsamy, S., M. Bharani, P. Sudha, P. Nagarajan, L. Arul, R. Saraswathi, P. Balasubramanian and J. Ramalingam. 2010. Functional markers assisted selection for bacterial leaf blight resistance genes in rice (Oryza sativa L.). Plant Breeding, 129:400-406